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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922236.1_cds_XP_016471068.1_63451
CDS Infomation

[gene=LOC107793256] [db_xref=GeneID:107793256] [protein=probable trehalose-phosphate phosphatase F] [protein_id=XP_016471068.1] [location=complement(join(29535..29588,29674..29766,29944..30014,30192..30261,30365..30442,30549..30650,30741..30797,30923..31048,31145..31216,31289..31429,31533..31823))] [gbkey=CDS]
Sequence

ATGGACTTGAATTCGACGAAAGCCTCTCCAGTTCTTACGGATCCTTCACCATTGAACAAG
TCCAGATTGGGGATCCATTCTAGTTTGTTGCCTTACTCACAATCTGGGCCTTCATTCTCC
ACTAGCGTGCTAACAATTCCTAGAAAGAAGCCAGCGAAGCTTGATGATGTTCGATCCAAT
GGTTGGCTCGACGCAATGATGTCTTCTTCACCTCCTAGGAAGAAGATTCTGAAGGAAGTA
AACATTGATGTTTCTTCCGATGATGCTGATGTTACTCACCTTTCTTGGATGATCAAGTAT
CCATCAGCTCTCAACTCCTTTCAGCAAATTATGAGGCAAGCAAGGAATAAACAGATAGTC
ATCTTCTTAGATTATGATGGGACTCTTTCTCCTATTGTTGATGACCCTGACCGTGCTTTT
ATGTCCAATGAGATGCGCTCCGCTGTCAGGAATGTTGCAAAGTATTTCCCAACAGCCATC
ATAAGTGGAAGAAGACGTGATAAGGTTTATGAGCTGGTAGGTCTAACTGAACTTTATTAT
GCCGGTAGCCATGGTATGGACATCATGTTGCCAGTCAAAAATATGTCGTCTACTAACGAT
TCTAAGTGTATTAAATCTACTGATCAGCAGGGCAAGGAAGTTAATCTGTTCCAGCCTGCT
CGTAAATTTTTACCTATGATTGATGAGGTTTTTAAAACCCTTGTCGAGAAAACTAAAGAC
ATTAAGGGTGCAAAGGTTGAGCACCATAAGTTTTGTGCCTCTGTACATTACCGTAATGTA
GATGAAAATAATTGGCCAGTCGTTGCACAATATGTCCATGATGTCTTGAAAGACTACCCT
CGACTACGGCTAACTCATGGGCGGAAGGTTTTAGAGCTCCGTCCTGTAATTGATTGGCAC
AAAGGAAAAGCAGTTGAATTCCTGCTGGAATCACTGGGTTTTAGTAACAGCAATGACGTG
CTCCCGATATATATTGGAGATGACAGCACAGACGAAGATGCATTCAAGGCATTGAGAGGG
AAATATCAAGGTTATGGAATTCTTGTTTCAACTATCCCAAAAGAGAGCAATGCTTTCTTC
TCTCTCAGGGATCCTTCAGAGGTCAAAGAATTCTTGGAATCTCTTGCAAGGACAATGGAG
GATAAAGCTATATAA

Peptide Sequence

PEP ID

XP_016471068.1
PEP Infomation

PREDICTED: probable trehalose-phosphate phosphatase F [Nicotiana tabacum]
Sequence

MDLNSTKASPVLTDPSPLNKSRLGIHSSLLPYSQSGPSFSTSVLTIPRKKPAKLDDVRSN
GWLDAMMSSSPPRKKILKEVNIDVSSDDADVTHLSWMIKYPSALNSFQQIMRQARNKQIV
IFLDYDGTLSPIVDDPDRAFMSNEMRSAVRNVAKYFPTAIISGRRRDKVYELVGLTELYY
AGSHGMDIMLPVKNMSSTNDSKCIKSTDQQGKEVNLFQPARKFLPMIDEVFKTLVEKTKD
IKGAKVEHHKFCASVHYRNVDENNWPVVAQYVHDVLKDYPRLRLTHGRKVLELRPVIDWH
KGKAVEFLLESLGFSNSNDVLPIYIGDDSTDEDAFKALRGKYQGYGILVSTIPKESNAFF
SLRDPSEVKEFLESLARTMEDKAI

Transcript Sequence

Gene sequence data has not been registered.